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recombination events  (Simplot Science)

 
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    Simplot Science recombination events
    <t>Recombination</t> analysis of CK/CH/HBBD/BD6 and CK/CH/HBBD/BD3. The genomic characteristics of IBV and the whole-genome recombination analysis were conducted using the Simplot software for Bootscan analysis (window size: 200 bp, step size: 20 bp).
    Recombination Events, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/recombination events/product/Simplot Science
    Average 86 stars, based on 1 article reviews
    recombination events - by Bioz Stars, 2026-06
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    1) Product Images from "Pathogen identification and analysis of broiler bronchial obstruction syndrome using high-throughput sequencing technology"

    Article Title: Pathogen identification and analysis of broiler bronchial obstruction syndrome using high-throughput sequencing technology

    Journal: Poultry Science

    doi: 10.1016/j.psj.2026.107032

    Recombination analysis of CK/CH/HBBD/BD6 and CK/CH/HBBD/BD3. The genomic characteristics of IBV and the whole-genome recombination analysis were conducted using the Simplot software for Bootscan analysis (window size: 200 bp, step size: 20 bp).
    Figure Legend Snippet: Recombination analysis of CK/CH/HBBD/BD6 and CK/CH/HBBD/BD3. The genomic characteristics of IBV and the whole-genome recombination analysis were conducted using the Simplot software for Bootscan analysis (window size: 200 bp, step size: 20 bp).

    Techniques Used: Software



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    <t>Recombination</t> analysis of CK/CH/HBBD/BD6 and CK/CH/HBBD/BD3. The genomic characteristics of IBV and the whole-genome recombination analysis were conducted using the Simplot software for Bootscan analysis (window size: 200 bp, step size: 20 bp).
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    Representative recombinant CKPV strain and predicted <t>recombination</t> events with composite breakpoints indicated by the line intersection.
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    Image Search Results


    Recombination analysis of CK/CH/HBBD/BD6 and CK/CH/HBBD/BD3. The genomic characteristics of IBV and the whole-genome recombination analysis were conducted using the Simplot software for Bootscan analysis (window size: 200 bp, step size: 20 bp).

    Journal: Poultry Science

    Article Title: Pathogen identification and analysis of broiler bronchial obstruction syndrome using high-throughput sequencing technology

    doi: 10.1016/j.psj.2026.107032

    Figure Lengend Snippet: Recombination analysis of CK/CH/HBBD/BD6 and CK/CH/HBBD/BD3. The genomic characteristics of IBV and the whole-genome recombination analysis were conducted using the Simplot software for Bootscan analysis (window size: 200 bp, step size: 20 bp).

    Article Snippet: Bootscan analysis performed using Simplot software ( ) further validated the recombination events identified by RDP4 software and no recombination events were found in the S gene.

    Techniques: Software

    Results of the recombination analysis of the XH2109 strain. Strains were subjected to similarity plot using SimPlot version 3.5.1. A. Recombination analysis results of the XH2109 strain against FAdV-8a ( KT862810 ), FAdV-8b ( KT862811 ), CH/GDLZ/201801 ( MK387061 ), and CH/HBXT/1907 ( OM868085.1 ). The blue, yellow, red and green peak plots represent FAdV-8a, FAdV-8b, CH/HBXT/1907 and CH/GDLZ/201801, respectively. B Recombination analysis results of the XH2109 strain against six recent Chinese FAdV-8a and FAdV-8b strains. The yellow, blue, gray, pink, red, and green peak plots represent HD2402 ( WXX18678.1 ), HeB20 ( UWT60572.1 ), QD2016 ( AWT08526.1 ), SD1356 ( AYC35465.1 ), SD2009 ( UXL82796.1 ), and JL170408 ( MN417117.1 ), respectively.

    Journal: Poultry Science

    Article Title: Characterization of a natural recombinant fowl adenovirus of serotypes 8a and 8b

    doi: 10.1016/j.psj.2026.106789

    Figure Lengend Snippet: Results of the recombination analysis of the XH2109 strain. Strains were subjected to similarity plot using SimPlot version 3.5.1. A. Recombination analysis results of the XH2109 strain against FAdV-8a ( KT862810 ), FAdV-8b ( KT862811 ), CH/GDLZ/201801 ( MK387061 ), and CH/HBXT/1907 ( OM868085.1 ). The blue, yellow, red and green peak plots represent FAdV-8a, FAdV-8b, CH/HBXT/1907 and CH/GDLZ/201801, respectively. B Recombination analysis results of the XH2109 strain against six recent Chinese FAdV-8a and FAdV-8b strains. The yellow, blue, gray, pink, red, and green peak plots represent HD2402 ( WXX18678.1 ), HeB20 ( UWT60572.1 ), QD2016 ( AWT08526.1 ), SD1356 ( AYC35465.1 ), SD2009 ( UXL82796.1 ), and JL170408 ( MN417117.1 ), respectively.

    Article Snippet: To verify potential recombination events, recombination analysis of the XH2109 strain was performed using Simplot software.

    Techniques:

    Recombination analysis of the recombinant strains was conducted using SimPlot software. Recombination breakpoints are indicated by the intersections of the red and brown lines, respectively, within a 200 bp-wide window with a 20 bp step size.

    Journal: Frontiers in Veterinary Science

    Article Title: Genetic variability and phylogenetic analysis of the VP2 gene of feline parvovirus in Harbin

    doi: 10.3389/fvets.2026.1783463

    Figure Lengend Snippet: Recombination analysis of the recombinant strains was conducted using SimPlot software. Recombination breakpoints are indicated by the intersections of the red and brown lines, respectively, within a 200 bp-wide window with a 20 bp step size.

    Article Snippet: Validation of the recombination event using SimPlot software confirmed the findings ( ).

    Techniques: Recombinant, Software

    Recombination analysis on the genomes of the new BVDV isolates.

    Journal: Animals : an Open Access Journal from MDPI

    Article Title: Molecular Characteristics and Pathogenicity Analysis of Bovine Viral Diarrhea Virus Strain Isolated from Persistently Infected Cattle

    doi: 10.3390/ani16010153

    Figure Lengend Snippet: Recombination analysis on the genomes of the new BVDV isolates.

    Article Snippet: To investigate possible gene recombination events, SimPlot software (version 3.5.1) was employed to analyze the genetic recombination between the newly isolated strain and reference BVDV strains.

    Techniques:

    Representative recombinant CKPV strain and predicted recombination events with composite breakpoints indicated by the line intersection.

    Journal: Poultry Science

    Article Title: Novel genotyping and genetic heterogeneity of chicken parvovirus in central and Eastern China

    doi: 10.1016/j.psj.2025.105997

    Figure Lengend Snippet: Representative recombinant CKPV strain and predicted recombination events with composite breakpoints indicated by the line intersection.

    Article Snippet: Recombination analysis using RDP4 and SimPlot software revealed six representative recombination events ( , ).

    Techniques: Recombinant